Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_03460 | Not Available | + | 731127 - 731306 | 6187.23 |
| fe(3+) abc transporter substrate-binding protein | HMY34_03465 | P72827 | + | 731465 - 732484 | 37155.1 |
| iron abc transporter permease | HMY34_03470 | P71338 | + | 732517 - 734112 | 58104.3 |
| abc transporter atp-binding protein | HMY34_03475 | Q5L222 | + | 734112 - 735155 | 38274.5 |
| hypothetical protein | HMY34_03480 | Not Available | - | 735179 - 735619 | 16158.4 |
| dna topoisomerase iii | HMY34_03485 | Q9KQF5 | + | 735904 - 737970 | 75595.7 |
| nad-dependent succinate-semialdehyde dehydrogenase | HMY34_03490 | Q9I6M5 | + | 737964 - 739415 | 51287.7 |
| trna pseudouridine(55) synthase trub | HMY34_03495 | Q3KI82 | - | 739390 - 740328 | 33833.1 |
| 30s ribosome-binding factor rbfa | HMY34_03500 | B8GP03 | - | 740325 - 740771 | 16354.1 |
| translation initiation factor if-2 | HMY34_03505 | B8GP02 | - | 740775 - 743006 | 79935.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.