Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| catalase/peroxidase hpi | HMY34_03160 | Q3A5D3 | - | 670563 - 672743 | 79329.0 |
| energy transducer tonb | HMY34_03165 | Q9RMT3 | - | 673040 - 673537 | 18800.0 |
| tonb system transport protein exbd | HMY34_03170 | P72203 | - | 673819 - 674202 | 14257.5 |
| tonb-system energizer exbb | HMY34_03175 | P43008 | - | 674199 - 674630 | 15844.1 |
| tonb-dependent receptor | HMY34_03180 | P81549 | + | 674871 - 677168 | 80673.1 |
| fe2+-dependent dioxygenase | HMY34_03185 | Q1GYV3 | + | 677171 - 677854 | 24928.8 |
| fe(3+) abc transporter substrate-binding protein | HMY34_03190 | Q8DLH9 | + | 677866 - 678873 | 36497.6 |
| hupe/urej family protein | HMY34_03195 | P27650 | + | 678928 - 679521 | 20186.2 |
| hypothetical protein | HMY34_03200 | Not Available | + | 679534 - 680058 | 18368.6 |
| duf1007 family protein | HMY34_03205 | Not Available | + | 680092 - 680679 | 21358.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.