Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| shikimate kinase | HMY34_03010 | Q3SM89 | + | 637306 - 637842 | 20099.4 |
| 3-dehydroquinate synthase | HMY34_03015 | B8GPV3 | + | 637829 - 638905 | 39065.2 |
| duf3131 domain-containing protein | HMY34_03020 | Not Available | - | 638906 - 640222 | 48735.7 |
| glycosyltransferase | HMY34_03025 | P37653 | - | 640219 - 642039 | 69074.1 |
| glycoside hydrolase family 2 | HMY34_03030 | T2KPJ7 | - | 642052 - 644202 | 82032.9 |
| atp-binding protein | HMY34_03035 | Q8CXL7 | - | 644205 - 644636 | 16093.2 |
| ndp-sugar synthase | HMY34_03040 | P74285 | - | 644636 - 645826 | 43815.8 |
| stas domain-containing protein | HMY34_03045 | Q9WVX8 | - | 645862 - 646200 | 12104.9 |
| histidine kinase | HMY34_03050 | P9WKS6 | + | 646413 - 647561 | 40930.1 |
| response regulator | HMY34_03055 | Q54YZ9 | + | 647558 - 649225 | 61103.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.