Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucine--trna ligase | HMY34_19560 | Q31IE8 | + | 3993559 - 3996150 | 97240.9 |
| hypothetical protein | HMY34_19565 | Not Available | + | 3996150 - 3996644 | 18273.0 |
| nad-binding protein | HMY34_19570 | P0ABQ3 | - | 3996637 - 3997518 | 30425.0 |
| bifunctional 23s rrna (guanine(2069)-n(7))-methyltransferase rlmk/23s rrna (guanine(2445)-n(2))-methyltransferase rlml | HMY34_19575 | A1TZG2 | + | 3997699 - 3999774 | 78685.3 |
| hypothetical protein | HMY34_19580 | Not Available | + | 3999956 - 4001251 | 47509.0 |
| tyrosine-type recombinase/integrase | HMY34_19585 | O50655 | + | 4001419 - 4002363 | 34257.3 |
| aspartate--trna ligase | HMY34_19590 | B8GUK0 | - | 4002431 - 4004200 | 66510.9 |
| porin family protein | HMY34_19595 | Not Available | - | 4004330 - 4004893 | 19726.0 |
| outer membrane beta-barrel protein | HMY34_19600 | Not Available | - | 4004952 - 4005617 | 22442.0 |
| zinc ribbon domain-containing protein | HMY34_19605 | Not Available | - | 4005770 - 4006027 | 8764.36 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.