Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_18660 | Not Available | - | 3794824 - 3795510 | 25733.0 |
| aaa family atpase | HMY34_18665 | O25711 | - | 3795510 - 3796643 | 42978.4 |
| thioredoxin | HMY34_18670 | Q8JG64 | + | 3796718 - 3797071 | 13026.8 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | HMY34_18675 | P13016 | + | 3797068 - 3797631 | 20960.9 |
| meta domain-containing protein | HMY34_18680 | Not Available | + | 3797785 - 3798387 | 21062.1 |
| serine hydroxymethyltransferase | HMY34_18685 | Q0ABQ9 | + | 3798479 - 3799756 | 45868.8 |
| transcriptional regulator nrdr | HMY34_18690 | Q607U5 | + | 3799763 - 3800272 | 19586.5 |
| bifunctional diaminohydroxyphosphoribosylaminopyrimidine deaminase/5-amino-6-(5-phosphoribosylamino)uracil reductase ribd | HMY34_18695 | P25539 | + | 3800299 - 3801390 | 39081.5 |
| riboflavin synthase | HMY34_18700 | P51961 | + | 3801390 - 3802055 | 23421.1 |
| 3,4-dihydroxy-2-butanone-4-phosphate synthase | HMY34_18705 | Q9HWX4 | + | 3802062 - 3803168 | 40823.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.