Thiothrix subterranea UQM 41459, Ku-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix subterranea
StrainUQM 41459, Ku-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix subterranea UQM 41459, Ku-5

Accession NumberCP053482.1

Gene Summary

Adenine Count

985194 bp

Thymine Count

987387 bp

Guanine Count

1033662 bp

Cytosine Count

1030425 bp

Genome Length

4036668 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
outer membrane beta-barrel proteinHMY34_17210P09146-3491688 - 349231121589.2
outer membrane protein assembly factor bamdHMY34_17215Q9JVB7-3492415 - 349321229800.1
23s rrna pseudouridine(1911/1915/1917) synthase rludHMY34_17220P33643+3493276 - 349423235456.9
peptidoglycan editing factor pgefHMY34_17225P33663+3494229 - 349499327162.3
atp-binding cassette domain-containing proteinHMY34_17230P45051+3494994 - 349596835571.1
helix-hairpin-helix domain-containing proteinHMY34_17235P39694+3496079 - 349648914341.9
udp-glucose 4-epimerase galeHMY34_17240P55180+3496563 - 349758837245.2
polysaccharide export proteinHMY34_17245Q8ZNQ9+3497782 - 349846524004.9
duf697 domain-containing proteinHMY34_17250Q8R6K8-3498520 - 349983948148.9
gtp-binding proteinHMY34_17255B1I6S2-3499871 - 350137055011.6

Displaying genes 3441 – 3450 of 4005 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites