Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor | HMY34_16860 | P35165 | + | 3418292 - 3418897 | 23325.5 |
| hypothetical protein | HMY34_16865 | Not Available | + | 3418894 - 3419310 | 15322.1 |
| hypothetical protein | HMY34_16870 | Not Available | + | 3419342 - 3419578 | 8768.22 |
| duf3106 domain-containing protein | HMY34_16875 | Not Available | + | 3419559 - 3420038 | 18486.4 |
| rna polymerase sigma factor rpos | HMY34_16880 | P45684 | + | 3420364 - 3421377 | 38347.6 |
| xcc1710-like domain-containing protein | HMY34_16885 | P18152 | - | 3421382 - 3421753 | 13561.2 |
| alanine transaminase | HMY34_16890 | P77434 | + | 3421842 - 3423035 | 44641.8 |
| homoserine dehydrogenase | HMY34_16895 | P29365 | + | 3423038 - 3424348 | 46279.0 |
| threonine synthase | HMY34_16900 | P37145 | + | 3424353 - 3425783 | 51990.6 |
| hydrolase | HMY34_16905 | Not Available | + | 3425829 - 3426521 | 25647.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.