Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_16360 | Not Available | - | 3311742 - 3312230 | 18833.4 |
| is4 family transposase | HMY34_16365 | Q46731 | + | 3312295 - 3313629 | 50960.8 |
| hypothetical protein | HMY34_16370 | Q8YV57 | - | 3313607 - 3315301 | 62974.0 |
| hypothetical protein | HMY34_16375 | Not Available | + | 3315373 - 3315753 | 13305.7 |
| hypothetical protein | HMY34_16380 | Not Available | + | 3315762 - 3316958 | 45872.0 |
| atp-dependent helicase | HMY34_16385 | P94593 | + | 3316942 - 3321129 | 157506.0 |
| 3'-5' exonuclease | HMY34_16390 | O50607 | + | 3321152 - 3321931 | 29734.3 |
| 23s rrna (uracil(1939)-c(5))-methyltransferase rlmd | HMY34_16395 | Q2SL27 | + | 3321928 - 3323277 | 50255.3 |
| nad-dependent dna ligase liga | HMY34_16400 | B8GTL0 | + | 3323300 - 3325309 | 73007.1 |
| Trna-gly | Not Available | Not Available | + | 3325382 - 3325456 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.