Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_16310 | Not Available | - | 3305453 - 3305695 | 8943.8 |
| duf2559 domain-containing protein | HMY34_16315 | Not Available | + | 3305943 - 3306128 | 7141.62 |
| putative adenosine monophosphate-protein transferase fic | HMY34_16320 | P20605 | + | 3306118 - 3306708 | 22386.3 |
| glucose-6-phosphate dehydrogenase | HMY34_16325 | Not Available | + | 3306911 - 3307762 | 32384.1 |
| is5 family transposase | HMY34_16330 | P76071 | + | 3307882 - 3308922 | 39354.1 |
| hypothetical protein | HMY34_16335 | Not Available | - | 3309017 - 3309160 | 5327.27 |
| wd40 repeat domain-containing protein | HMY34_16340 | C4YFX2 | - | 3309145 - 3310482 | 48443.7 |
| hypothetical protein | HMY34_16345 | Not Available | + | 3310561 - 3310785 | 8297.25 |
| type ii toxin-antitoxin system rele/pare family toxin | HMY34_16350 | Not Available | + | 3310969 - 3311337 | 13572.2 |
| dna-binding transcriptional regulator | HMY34_16355 | Q9KMA5 | + | 3311334 - 3311657 | 12016.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.