Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase sigma factor rpoe | HMY34_16210 | Q06198 | + | 3288367 - 3288942 | 21899.1 |
| sigma-e factor negative regulatory protein | HMY34_16215 | Not Available | + | 3288980 - 3289588 | 21707.7 |
| hypothetical protein | HMY34_16220 | P38108 | + | 3289575 - 3290456 | 31586.8 |
| soxr reducing system rsec family protein | HMY34_16225 | P44060 | + | 3290539 - 3291021 | 17006.9 |
| do family serine endopeptidase | HMY34_16230 | Q4KGQ4 | + | 3291049 - 3292443 | 49097.2 |
| glutaredoxin family protein | HMY34_16235 | Q54N68 | + | 3292430 - 3292687 | 9882.78 |
| elongation factor 4 | HMY34_16240 | Q65VN2 | + | 3292680 - 3294485 | 67112.3 |
| signal peptidase i | HMY34_16245 | P26844 | + | 3294505 - 3295263 | 28184.4 |
| duf4845 domain-containing protein | HMY34_16250 | Not Available | + | 3295344 - 3295724 | 14220.0 |
| ribonuclease iii | HMY34_16255 | A5F5H8 | + | 3295721 - 3296386 | 24370.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.