Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rip metalloprotease rsep | HMY34_16010 | P0AEH2 | + | 3245082 - 3246458 | 49965.3 |
| outer membrane protein assembly factor bama | HMY34_16015 | A8GID8 | + | 3246461 - 3248752 | 83950.6 |
| omph family outer membrane protein | HMY34_16020 | Not Available | + | 3248756 - 3249337 | 21582.2 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | HMY34_16025 | B6J8K9 | + | 3249343 - 3250332 | 34607.5 |
| 3-hydroxyacyl-acp dehydratase fabz | HMY34_16030 | B0TP72 | + | 3250339 - 3250791 | 16680.6 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | HMY34_16035 | Q3SKM9 | + | 3250797 - 3251567 | 27869.3 |
| lipid-a-disaccharide synthase | HMY34_16040 | Q3IIW8 | + | 3251571 - 3252725 | 42833.9 |
| hypothetical protein | HMY34_16045 | Not Available | + | 3252738 - 3253277 | 20245.6 |
| ribonuclease hii | HMY34_16050 | A8ALA5 | + | 3253277 - 3253849 | 20290.7 |
| glucose-6-phosphate dehydrogenase | HMY34_16055 | Not Available | - | 3253939 - 3254400 | 16717.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.