Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_15810 | Not Available | + | 3198557 - 3199084 | 18759.7 |
| type iv pilin protein | HMY34_15815 | G3XD43 | + | 3199101 - 3199604 | 18236.4 |
| hypothetical protein | HMY34_15820 | Q87B49 | + | 3199658 - 3203353 | 133868.0 |
| peptide chain release factor n(5)-glutamine methyltransferase | HMY34_15825 | Q9KQ26 | - | 3203350 - 3204276 | 33594.9 |
| peptide chain release factor 1 | HMY34_15830 | B8GLA1 | - | 3204269 - 3205348 | 40060.1 |
| glutamyl-trna reductase | HMY34_15835 | Q3JDR3 | - | 3205355 - 3206617 | 45712.9 |
| tetratricopeptide repeat protein | HMY34_15840 | P42810 | + | 3206808 - 3208526 | 62264.6 |
| outer membrane lipoprotein lolb | HMY34_15845 | A4VPC2 | + | 3208555 - 3209193 | 23681.1 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | HMY34_15850 | A4VPC3 | + | 3209199 - 3210056 | 30488.8 |
| Trna-gln | Not Available | Not Available | + | 3210064 - 3210138 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.