Thiothrix subterranea UQM 41459, Ku-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix subterranea
StrainUQM 41459, Ku-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix subterranea UQM 41459, Ku-5

Accession NumberCP053482.1

Gene Summary

Adenine Count

985194 bp

Thymine Count

987387 bp

Guanine Count

1033662 bp

Cytosine Count

1030425 bp

Genome Length

4036668 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
type i-e crispr-associated endoribonuclease cas2HMY34_15660P45956+3172697 - 317299911328.8
hypothetical proteinHMY34_15665Not Available+3173098 - 317339710942.1
glucose-6-phosphate dehydrogenaseHMY34_15670Not Available+3173391 - 31735736754.01
hypothetical proteinHMY34_15675Not Available+3177367 - 317780715490.8
fad-dependent 5-carboxymethylaminomethyl-2-thiouridine(34) oxidoreductase mnmcHMY34_15680Q7NWN9+3177922 - 317952958473.1
hypothetical proteinHMY34_15685A2VD12-3179526 - 317997216057.0
cytochrome c5 family proteinHMY34_15690P00123+3180160 - 318085522315.3
Tmrna,resume consensus sequence (at 85): aatagtcgcaaacgacgaNot AvailableNot Available+3181269 - 3181633Not Available
integrase arm-type dna-binding domain-containing proteinHMY34_15700P08320+3181798 - 318301245485.0
hypothetical proteinHMY34_15705Not Available+3183371 - 318366111283.3

Displaying genes 3131 – 3140 of 4005 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites