Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| signal peptidase i | HMY34_15610 | A8GM78 | - | 3162688 - 3163596 | 34017.5 |
| crispr-associated helicase/endonuclease cas3 | HMY34_15615 | P38036 | + | 3163758 - 3166433 | 100636.0 |
| type ii toxin-antitoxin system vapc family toxin | HMY34_15620 | E4QWH2 | - | 3166430 - 3166849 | 15896.4 |
| abrb/maze/spovt family dna-binding domain-containing protein | HMY34_15625 | E4QWH3 | - | 3166846 - 3167079 | 8880.49 |
| type i-e crispr-associated protein cse1/casa | HMY34_15630 | Q46901 | + | 3167338 - 3168801 | 55099.1 |
| type i-e crispr-associated protein cse2/casb | HMY34_15635 | P76632 | + | 3168798 - 3169238 | 17114.7 |
| type i-e crispr-associated protein cas7/cse4/casc | HMY34_15640 | Q46899 | + | 3169244 - 3170524 | 47071.7 |
| type i-e crispr-associated protein cas5/casd | HMY34_15645 | Q46898 | + | 3170521 - 3171180 | 24827.0 |
| type i-e crispr-associated protein cas6/cse3/case | HMY34_15650 | Q46897 | + | 3171167 - 3171766 | 22831.0 |
| type i-e crispr-associated endonuclease cas1 | HMY34_15655 | Q46896 | + | 3171808 - 3172695 | 32574.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.