Thiothrix subterranea UQM 41459, Ku-5

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Thiotrichales

Family

Thiotrichaceae

Genus

Thiothrix

Description

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderThiotrichales
FamilyThiotrichaceae
GenusThiothrix
SpeciesThiothrix subterranea
StrainUQM 41459, Ku-5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Thiothrix subterranea UQM 41459, Ku-5

Accession NumberCP053482.1

Gene Summary

Adenine Count

985194 bp

Thymine Count

987387 bp

Guanine Count

1033662 bp

Cytosine Count

1030425 bp

Genome Length

4036668 bp

Protein-coding Genes

3893 genes

Non-Coding Genes

62 genes

# of Chromosomes/Plasmids

4

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
isl3 family transposaseHMY34_15560Q06126-3149946 - 315119648227.7
trna 2-selenouridine(34) synthase mnmhHMY34_15565A1S1Z4-3151756 - 315288642560.7
selenide, water dikinase seldHMY34_15570Q66AP0-3152892 - 315393236555.2
exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferaseHMY34_15575B3FN88-3153973 - 315467426612.6
type ii secretion system inner membrane protein gspfHMY34_15580Q00513-3154812 - 315603244558.5
type ii secretion system atpase gspeHMY34_15585Q00512-3156032 - 315754955637.3
type ii secretion system secretin gspdHMY34_15590P35818-3157546 - 315960672182.9
hypothetical proteinHMY34_15595Not Available-3159672 - 316043927583.7
duf1015 domain-containing proteinHMY34_15600Not Available+3160604 - 316182444544.0
hypothetical proteinHMY34_15605Not Available+3161942 - 316269127500.6

Displaying genes 3111 – 3120 of 4005 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Export CSV
Compound search
Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

Clear
Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites