Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tetraacyldisaccharide 4'-kinase | HMY34_15460 | Q1GZI1 | + | 3131246 - 3132175 | 34395.9 |
| trm112 family protein | HMY34_15465 | B8GR39 | + | 3132168 - 3132359 | 7118.74 |
| 3-deoxy-manno-octulosonate cytidylyltransferase | HMY34_15470 | B8GR40 | + | 3132356 - 3133096 | 26766.1 |
| hypothetical protein | HMY34_15475 | Q08263 | + | 3133248 - 3134645 | 47683.2 |
| hypothetical protein | HMY34_15480 | Not Available | - | 3134832 - 3135137 | 11254.1 |
| hypothetical protein | HMY34_15485 | Not Available | - | 3135441 - 3135746 | 10933.1 |
| malate dehydrogenase (quinone) | HMY34_15490 | Q2SF51 | + | 3136110 - 3137612 | 54433.6 |
| isocitrate lyase | HMY34_15495 | P51066 | + | 3137837 - 3139147 | 47473.8 |
| ribonuclease e activity regulator rraa | HMY34_15500 | Q47BF5 | + | 3139245 - 3139736 | 17608.3 |
| trap transporter large permease subunit | HMY34_15505 | O07838 | - | 3139813 - 3141402 | 57518.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.