Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| crp/fnr family transcriptional regulator | HMY34_01510 | P29286 | - | 318191 - 318892 | 26481.2 |
| glucose-1-phosphate adenylyltransferase | HMY34_01515 | C5BQ92 | + | 319048 - 320316 | 46646.8 |
| gnat family n-acetyltransferase | HMY34_01520 | Not Available | - | 320324 - 321448 | 42395.4 |
| hypothetical protein | HMY34_01525 | Not Available | - | 321611 - 321808 | 7514.79 |
| anthranilate phosphoribosyltransferase | HMY34_01530 | O66585 | - | 321853 - 322974 | 40382.5 |
| sel1 repeat family protein | HMY34_01535 | Not Available | + | 323152 - 323571 | 14902.8 |
| aspartate 1-decarboxylase | HMY34_01540 | Q1H3S3 | - | 323948 - 324328 | 13671.2 |
| pantoate--beta-alanine ligase | HMY34_01545 | A3QHQ2 | - | 324378 - 325244 | 31456.2 |
| 3-methyl-2-oxobutanoate hydroxymethyltransferase | HMY34_01550 | A1WUU5 | - | 325255 - 326064 | 28657.9 |
| helix-turn-helix transcriptional regulator | HMY34_01555 | Not Available | + | 326243 - 327199 | 36986.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.