Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_15410 | A5FSU1 | - | 3119730 - 3120878 | 43456.1 |
| hnh nuclease family protein | HMY34_15415 | P0A1S9 | + | 3121075 - 3121425 | 13182.5 |
| succinyldiaminopimelate transaminase | HMY34_15420 | B1I544 | + | 3121506 - 3122699 | 42831.5 |
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | HMY34_15425 | B8GPS1 | + | 3122727 - 3123560 | 29651.4 |
| hypothetical protein | HMY34_15430 | Not Available | - | 3123557 - 3125164 | 60917.6 |
| lytic transglycosylase domain-containing protein | HMY34_15435 | O31608 | + | 3125368 - 3126015 | 22868.3 |
| polyphosphate kinase 1 | HMY34_15440 | P0DP44 | - | 3126012 - 3128096 | 78976.2 |
| mota/tolq/exbb proton channel family protein | HMY34_15445 | P72604 | + | 3128374 - 3129075 | 24743.9 |
| biopolymer transporter exbd | HMY34_15450 | Q9RMT1 | + | 3129072 - 3129506 | 15977.2 |
| lipid a export permease/atp-binding protein msba | HMY34_15455 | Q0A4U4 | + | 3129508 - 3131259 | 64960.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.