Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| polynucleotide adenylyltransferase pcnb | HMY34_15360 | Q8ZRQ8 | + | 3106359 - 3107669 | 49855.7 |
| 2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase | HMY34_15365 | P43777 | + | 3107666 - 3108163 | 17720.6 |
| efflux rnd transporter permease subunit | HMY34_15370 | P25197 | - | 3108142 - 3111234 | 113082.0 |
| efflux rnd transporter periplasmic adaptor subunit | HMY34_15375 | A6TBH3 | - | 3111231 - 3112307 | 37819.9 |
| tetr/acrr family transcriptional regulator | HMY34_15380 | P94548 | - | 3112307 - 3112945 | 24302.6 |
| hypothetical protein | HMY34_15385 | A7SVT1 | + | 3113104 - 3114186 | 40487.7 |
| hypothetical protein | HMY34_15390 | Not Available | + | 3114263 - 3114703 | 16418.3 |
| duf29 domain-containing protein | HMY34_15395 | Not Available | + | 3114716 - 3115162 | 17486.9 |
| hypothetical protein | HMY34_15400 | Not Available | - | 3115236 - 3116624 | 54502.0 |
| gaf domain-containing protein | HMY34_15405 | Not Available | - | 3116624 - 3119743 | 119964.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.