Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| kinase/pyrophosphorylase | HMY34_15310 | Q81ZK5 | - | 3094183 - 3095013 | 31160.0 |
| phosphoenolpyruvate synthase | HMY34_15315 | Q02KR1 | - | 3095013 - 3097394 | 86706.5 |
| lysr family transcriptional regulator | HMY34_15320 | Q9F1R2 | + | 3097675 - 3098586 | 34357.1 |
| glycosyltransferase | HMY34_15325 | P71055 | - | 3098570 - 3099778 | 45461.6 |
| oxygen-independent coproporphyrinogen iii oxidase | HMY34_15330 | P77915 | + | 3100152 - 3101537 | 52668.8 |
| fumarate/nitrate reduction transcriptional regulator fnr | HMY34_15335 | P45199 | - | 3101566 - 3102318 | 28328.3 |
| cdp-diacylglycerol--serine o-phosphatidyltransferase | HMY34_15340 | Q48269 | + | 3102562 - 3103344 | 28575.4 |
| 2-isopropylmalate synthase | HMY34_15345 | Q605K7 | + | 3103461 - 3105011 | 55985.8 |
| uracil-dna glycosylase | HMY34_15350 | Q5SKC5 | + | 3105045 - 3105785 | 26953.5 |
| ribosomal protein s18-alanine n-acetyltransferase | HMY34_15355 | P0A946 | + | 3105811 - 3106236 | 15953.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.