Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rna polymerase factor sigma-54 | HMY34_15260 | A0A0H2ZGR9 | - | 3086103 - 3087596 | 56086.2 |
| lps export abc transporter atp-binding protein | HMY34_15265 | P0A9V3 | - | 3087722 - 3088447 | 26750.5 |
| lipopolysaccharide transport periplasmic protein lpta | HMY34_15270 | P45074 | - | 3088444 - 3088956 | 18301.0 |
| lps export abc transporter periplasmic protein lptc | HMY34_15275 | Not Available | - | 3088928 - 3089368 | 16521.7 |
| 3-deoxy-manno-octulosonate-8-phosphatase kdsc | HMY34_15280 | P0ABZ5 | - | 3089365 - 3089919 | 20438.5 |
| kpsf/gutq family sugar-phosphate isomerase | HMY34_15285 | Q8D1Q8 | - | 3089919 - 3090893 | 34288.8 |
| Trna-leu | Not Available | Not Available | + | 3090996 - 3091082 | Not Available |
| trna preq1(34) s-adenosylmethionine ribosyltransferase-isomerase quea | HMY34_15295 | B8GTQ5 | + | 3091162 - 3092196 | 37952.3 |
| hypothetical protein | HMY34_15300 | Not Available | + | 3092406 - 3093236 | 29998.1 |
| bifunctional methylenetetrahydrofolate dehydrogenase/methenyltetrahydrofolate cyclohydrolase fold | HMY34_15305 | B8GNT6 | - | 3093280 - 3094137 | 30438.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.