Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf4214 domain-containing protein | HMY34_14610 | Not Available | + | 2953081 - 2955852 | 94761.7 |
| hypothetical protein | HMY34_14615 | P48765 | + | 2955937 - 2958780 | 95052.5 |
| hypothetical protein | HMY34_14620 | Not Available | + | 2958999 - 2959232 | 7453.06 |
| methyltransferase | HMY34_14625 | P74360 | + | 2959346 - 2960884 | 56643.5 |
| o-antigen ligase family protein | HMY34_14630 | Not Available | - | 2960858 - 2962216 | 50110.8 |
| hypothetical protein | HMY34_14635 | Not Available | - | 2962231 - 2963532 | 49289.7 |
| polysaccharide biosynthesis tyrosine autokinase | HMY34_14640 | Q9F7B1 | - | 2963574 - 2966063 | 92449.2 |
| polysaccharide export protein | HMY34_14645 | Q8Z5G4 | - | 2966104 - 2966841 | 26616.9 |
| capsular biosynthesis protein | HMY34_14650 | P96717 | - | 2966897 - 2967718 | 29748.7 |
| polysaccharide biosynthesis protein | HMY34_14655 | P39853 | - | 2967803 - 2969752 | 71742.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.