Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pilin | HMY34_14460 | O30583 | - | 2920782 - 2921234 | 16116.2 |
| brnt family toxin | HMY34_14465 | Not Available | + | 2921481 - 2921771 | 11532.7 |
| brna antitoxin family protein | HMY34_14470 | Not Available | + | 2921737 - 2922006 | 10272.2 |
| abrb/maze/spovt family dna-binding domain-containing protein | HMY34_14475 | O07779 | + | 2922152 - 2922358 | 7853.86 |
| type ii toxin-antitoxin system vapc family toxin | HMY34_14480 | Not Available | + | 2922355 - 2922732 | 13429.9 |
| uma2 family endonuclease | HMY34_14485 | P72873 | - | 2922741 - 2923319 | 22033.1 |
| sigma-54-dependent fis family transcriptional regulator | HMY34_14490 | Q00934 | - | 2923378 - 2924811 | 52778.4 |
| histidine kinase | HMY34_14495 | P33639 | - | 2924831 - 2926459 | 60742.8 |
| nad+ synthase | HMY34_14500 | Q9PC24 | + | 2926722 - 2928383 | 60003.0 |
| p-ii family nitrogen regulator | HMY34_14505 | P21193 | + | 2928386 - 2928724 | 12320.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.