Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_14410 | Not Available | + | 2910113 - 2910508 | 14952.2 |
| prepilin peptidase | HMY34_14415 | P45794 | - | 2910513 - 2911388 | 32307.5 |
| type ii secretion system f family protein | HMY34_14420 | P22609 | - | 2911403 - 2912653 | 45407.0 |
| type iv-a pilus assembly atpase pilb | HMY34_14425 | P22608 | - | 2912747 - 2914468 | 63024.7 |
| atp-binding protein | HMY34_14430 | P24423 | - | 2914549 - 2916105 | 60191.1 |
| pd-(d/e)xk nuclease family transposase | HMY34_14435 | Not Available | + | 2916215 - 2917117 | 35021.5 |
| transcriptional regulator | HMY34_14440 | Not Available | - | 2917313 - 2917690 | 14200.3 |
| hypothetical protein | HMY34_14445 | P17830 | - | 2917997 - 2918764 | 28529.9 |
| o-antigen ligase family protein | HMY34_14450 | Not Available | - | 2918783 - 2919889 | 41725.4 |
| pilin | HMY34_14455 | Q07564 | - | 2920244 - 2920705 | 16725.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.