Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tandem-95 repeat protein | HMY34_14260 | Q05146 | + | 2878998 - 2882279 | 115131.0 |
| ubiquinone biosynthesis regulatory protein kinase ubib | HMY34_14265 | A1U669 | - | 2882337 - 2883908 | 61469.9 |
| atp-binding protein | HMY34_14270 | P9WLM8 | - | 2883905 - 2885053 | 43839.9 |
| duf2058 domain-containing protein | HMY34_14275 | P51024 | - | 2885123 - 2885686 | 21168.4 |
| rna-binding protein | HMY34_14280 | Q9WX39 | - | 2885780 - 2886043 | 9705.95 |
| cold-shock protein | HMY34_14285 | Q9KL16 | - | 2886182 - 2886385 | 7099.29 |
| hypothetical protein | HMY34_14290 | Not Available | + | 2886598 - 2887278 | 25132.3 |
| glucose-6-phosphate dehydrogenase | HMY34_14295 | P28917 | - | 2887407 - 2888054 | 24053.7 |
| hypothetical protein | HMY34_14300 | Not Available | + | 2888141 - 2888341 | 8034.87 |
| is3 family transposase | HMY34_14305 | P35878 | + | 2888403 - 2889571 | 44874.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.