Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| n-6 dna methylase | HMY34_14210 | Q60296 | - | 2863140 - 2866970 | 145668.0 |
| uma2 family endonuclease | HMY34_14215 | Not Available | - | 2866985 - 2867443 | 17214.5 |
| fluoride efflux transporter crcb | HMY34_14220 | B7UZG1 | + | 2867559 - 2867939 | 13660.2 |
| dna helicase recq | HMY34_14225 | P40724 | + | 2867957 - 2869789 | 69406.6 |
| hypothetical protein | HMY34_14230 | Not Available | + | 2869886 - 2870143 | 9575.42 |
| duf3368 domain-containing protein | HMY34_14235 | Not Available | + | 2870143 - 2870601 | 16561.4 |
| tir domain-containing protein | HMY34_14240 | Q54HT1 | - | 2870612 - 2874988 | 162170.0 |
| 16s rrna (adenine(1518)-n(6)/adenine(1519)-n(6))- dimethyltransferase rsma | HMY34_14245 | Q4ZMG5 | - | 2875112 - 2875906 | 30103.4 |
| ompa family protein | HMY34_14250 | P37665 | - | 2875903 - 2878245 | 82696.8 |
| hypothetical protein | HMY34_14255 | Not Available | - | 2878263 - 2878673 | 15412.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.