Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ornithine carbamoyltransferase | HMY34_14010 | Q31I95 | + | 2821332 - 2822267 | 34482.6 |
| exodeoxyribonuclease iii | HMY34_14015 | O26314 | + | 2822375 - 2823193 | 31023.5 |
| bama/tama family outer membrane protein | HMY34_14020 | O34731 | + | 2823144 - 2825330 | 78524.6 |
| ycei family protein | HMY34_14025 | B7V411 | - | 2825454 - 2826014 | 20330.0 |
| cytochrome b | HMY34_14030 | P75925 | - | 2826036 - 2826584 | 20265.1 |
| pirin family protein | HMY34_14035 | P73623 | - | 2826595 - 2827290 | 25736.3 |
| lysr family transcriptional regulator | HMY34_14040 | P43011 | + | 2827394 - 2828284 | 33053.9 |
| deda family protein | HMY34_14045 | O31823 | - | 2828286 - 2828888 | 22586.1 |
| phoh family protein | HMY34_14050 | O07635 | - | 2828903 - 2830324 | 52839.4 |
| peroxiredoxin | HMY34_14055 | Q8P9V9 | - | 2830366 - 2830839 | 17425.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.