Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HMY34_13910 | O53900 | + | 2802553 - 2804982 | 87207.5 |
| carotenoid 1,2-hydratase | HMY34_13915 | Not Available | + | 2805035 - 2806162 | 42399.9 |
| superoxide dismutase | HMY34_13920 | P37369 | + | 2806273 - 2806857 | 21124.7 |
| sco family protein | HMY34_13925 | Q1RIN4 | - | 2806928 - 2807581 | 23098.6 |
| duf2189 domain-containing protein | HMY34_13930 | Not Available | + | 2807709 - 2808728 | 35833.1 |
| cbb3-type cytochrome c oxidase subunit i | HMY34_13935 | Q9ZDE9 | + | 2808757 - 2810058 | 46490.0 |
| protoheme ix farnesyltransferase | HMY34_13940 | Q3J6R6 | - | 2810078 - 2810974 | 32399.8 |
| duf2189 domain-containing protein | HMY34_13945 | Not Available | - | 2810999 - 2811784 | 28284.1 |
| hypothetical protein | HMY34_13950 | Not Available | - | 2811833 - 2812456 | 22880.8 |
| surf1 family protein | HMY34_13955 | Q9Y810 | - | 2812453 - 2813235 | 28737.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.