Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_13710 | Not Available | - | 2763855 - 2764307 | 17196.0 |
| hypothetical protein | HMY34_13715 | Not Available | - | 2764312 - 2766693 | 91067.0 |
| xre family transcriptional regulator | HMY34_13720 | Not Available | + | 2767061 - 2767375 | 11056.5 |
| type ii toxin-antitoxin system hipa family toxin | HMY34_13725 | P23874 | + | 2767372 - 2768607 | 44764.5 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HMY34_13730 | Not Available | + | 2768674 - 2768931 | 9480.49 |
| type ii toxin-antitoxin system vapc family toxin | HMY34_13735 | Q52562 | + | 2768935 - 2769345 | 15494.6 |
| hnh endonuclease | HMY34_13740 | O34581 | - | 2769605 - 2770333 | 27721.5 |
| hypothetical protein | HMY34_13745 | Not Available | - | 2770373 - 2770528 | 6045.06 |
| nudix domain-containing protein | HMY34_13750 | P83843 | + | 2770962 - 2771543 | 21428.6 |
| atp-binding protein | HMY34_13755 | P9WLM8 | + | 2771610 - 2772812 | 44656.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.