Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| thioredoxin trxa | HMY34_13510 | Q9X2T1 | + | 2720387 - 2720713 | 11898.5 |
| transcription termination factor rho | HMY34_13515 | P0AG32 | + | 2721015 - 2722274 | 46890.4 |
| gtpase hflx | HMY34_13520 | P25519 | - | 2722377 - 2723657 | 48018.4 |
| rna chaperone hfq | HMY34_13525 | B8GNC7 | - | 2723692 - 2723922 | 8455.42 |
| trna (adenosine(37)-n6)-dimethylallyltransferase miaa | HMY34_13530 | B8GNC6 | - | 2724080 - 2725006 | 34491.6 |
| dna mismatch repair endonuclease mutl | HMY34_13535 | A4VQP2 | - | 2725006 - 2726871 | 69363.6 |
| trypsin-like serine protease | HMY34_13540 | Q9SHZ1 | - | 2726871 - 2728754 | 67792.9 |
| isoleucine--trna ligase | HMY34_13545 | B8GQR1 | + | 2728949 - 2731768 | 104741.0 |
| lipoprotein signal peptidase | HMY34_13550 | Q31ID1 | + | 2731797 - 2732282 | 17934.3 |
| argininosuccinate lyase | HMY34_13555 | B8GSV2 | - | 2732328 - 2733728 | 52346.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.