Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| homocitrate synthase | HMY34_13210 | P05342 | - | 2668708 - 2669859 | 41926.3 |
| d-amino acid dehydrogenase | HMY34_13215 | Q89T28 | - | 2670015 - 2671268 | 45449.0 |
| hypothetical protein | HMY34_13220 | Not Available | - | 2671275 - 2671475 | 7372.81 |
| sagb/thcox family dehydrogenase | HMY34_13225 | Q58779 | - | 2671472 - 2672980 | 55340.7 |
| grx4 family monothiol glutaredoxin | HMY34_13230 | P0AC71 | - | 2672980 - 2673387 | 14660.5 |
| hypothetical protein | HMY34_13235 | Not Available | - | 2673398 - 2673958 | 20771.1 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nife | HMY34_13240 | P08293 | + | 2674215 - 2675612 | 50985.4 |
| nitrogenase iron-molybdenum cofactor biosynthesis protein nifn | HMY34_13245 | P10336 | + | 2675605 - 2676993 | 49432.2 |
| hypothetical protein | HMY34_13250 | P65375 | - | 2676990 - 2677700 | 26681.6 |
| hypothetical protein | HMY34_13255 | Not Available | - | 2677672 - 2677899 | 9169.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.