Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| rnfabcdge type electron transport complex subunit d | HMY34_13110 | A1WTR8 | + | 2653075 - 2654076 | 35196.1 |
| electron transport complex subunit rsxg | HMY34_13115 | P97054 | + | 2654076 - 2654702 | 22483.1 |
| electron transport complex subunit e | HMY34_13120 | P97055 | + | 2654699 - 2655400 | 24736.2 |
| rnfh family protein | HMY34_13125 | Q603I8 | + | 2655397 - 2655672 | 10318.1 |
| hypothetical protein | HMY34_13130 | Not Available | + | 2655659 - 2656066 | 14943.7 |
| atp-dependent clp protease atp-binding subunit clpx | HMY34_13135 | Q607D1 | - | 2656026 - 2657417 | 50329.6 |
| nitrogen fixation protein nifm | HMY34_13140 | P23119 | - | 2657414 - 2658295 | 33408.0 |
| nitrogen fixation protein nifz | HMY34_13145 | P14889 | - | 2658288 - 2658728 | 16305.5 |
| nitrogen fixation protein nifw | HMY34_13150 | C1DH23 | - | 2658733 - 2659056 | 12392.6 |
| tetratricopeptide repeat protein | HMY34_13155 | Not Available | + | 2659394 - 2662939 | 132766.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.