Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin | HMY34_12960 | P11054 | + | 2623314 - 2623592 | 9977.85 |
| hypothetical protein | HMY34_12965 | Not Available | + | 2623605 - 2623922 | 11429.7 |
| fpra family a-type flavoprotein | HMY34_12970 | D5ARY8 | + | 2623915 - 2625207 | 48702.4 |
| 2fe-2s iron-sulfur cluster binding domain-containing protein | HMY34_12975 | P0CY92 | + | 2625257 - 2625541 | 10290.5 |
| (2fe-2s)-binding protein | HMY34_12980 | P37097 | + | 2625557 - 2625904 | 12868.6 |
| hypothetical protein | HMY34_12985 | P44014 | - | 2626042 - 2626581 | 20663.8 |
| nitrogen fixation protein nifq | HMY34_12990 | P11068 | + | 2626997 - 2627572 | 21542.2 |
| hypothetical protein | HMY34_12995 | P14300 | + | 2627551 - 2628189 | 23046.5 |
| is3 family transposase | HMY34_13000 | P35878 | + | 2628226 - 2629394 | 44874.8 |
| hypothetical protein | HMY34_13005 | P14300 | + | 2629411 - 2629752 | 12627.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.