Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| elongation factor tu | HMY34_06760 | Q8NL22 | - | 1364780 - 1365970 | 43070.8 |
| Trna-thr | Not Available | Not Available | + | 1366003 - 1366078 | Not Available |
| Trna-gly | Not Available | Not Available | + | 1366108 - 1366181 | Not Available |
| Trna-tyr | Not Available | Not Available | + | 1366249 - 1366333 | Not Available |
| udp-glucose/gdp-mannose dehydrogenase family protein | HMY34_06780 | O86422 | + | 1366518 - 1367843 | 48672.4 |
| hypothetical protein | HMY34_06785 | E1WAU5 | - | 1367852 - 1371457 | 129207.0 |
| outer membrane protein assembly factor | HMY34_06790 | D2TN56 | - | 1371454 - 1373226 | 64888.9 |
| d-alanyl-d-alanine carboxypeptidase/d-alanyl-d-alanine-endopeptidase | HMY34_06795 | P39844 | - | 1373267 - 1374742 | 54327.6 |
| trna (n6-threonylcarbamoyladenosine(37)-n6)-methyltransferase trmo | HMY34_06800 | P28634 | - | 1374762 - 1375481 | 26246.6 |
| duf218 domain-containing protein | HMY34_06805 | P0AB02 | - | 1375484 - 1376242 | 26966.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.