Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hnh endonuclease | HMY34_06460 | Not Available | - | 1319080 - 1319673 | 22372.2 |
| rna polymerase sigma factor rpoh | HMY34_06465 | P42378 | - | 1320182 - 1321051 | 32735.2 |
| hypothetical protein | HMY34_06470 | Not Available | + | 1321212 - 1322333 | 45305.5 |
| hypothetical protein | HMY34_06475 | Not Available | - | 1322341 - 1322820 | 17514.2 |
| duf302 domain-containing protein | HMY34_06480 | Not Available | - | 1322817 - 1323293 | 17840.5 |
| hypothetical protein | HMY34_06485 | Not Available | + | 1323486 - 1323743 | 9017.37 |
| doxx family protein | HMY34_06490 | Not Available | - | 1323804 - 1324427 | 23293.0 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HMY34_06495 | B8GN62 | - | 1324503 - 1326392 | 68414.5 |
| (2e,6e)-farnesyl diphosphate synthase | HMY34_06500 | P22939 | - | 1326463 - 1327356 | 32244.0 |
| exodeoxyribonuclease vii small subunit | HMY34_06505 | B8GN64 | - | 1327356 - 1327604 | 9111.73 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.