Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| prepilin-type n-terminal cleavage/methylation domain-containing protein | HMY34_06410 | P31740 | - | 1311324 - 1311941 | 23225.8 |
| prepilin-type n-terminal cleavage/methylation domain-containing protein | HMY34_06415 | P31738 | - | 1311938 - 1312333 | 14391.2 |
| type ii transport protein | HMY34_06420 | P31736 | - | 1312317 - 1312814 | 17834.8 |
| type ii secretion system major pseudopilin gspg | HMY34_06425 | Q00514 | - | 1312738 - 1313181 | 15815.9 |
| type ii secretion system f family protein | HMY34_06430 | P31744 | - | 1313236 - 1314471 | 44251.9 |
| type ii secretion system atpase gspe | HMY34_06435 | P31742 | - | 1314458 - 1316191 | 63872.3 |
| duf3025 domain-containing protein | HMY34_06440 | Not Available | - | 1316280 - 1317098 | 31129.3 |
| spor domain-containing protein | HMY34_06445 | Not Available | + | 1317208 - 1317756 | 20544.2 |
| hypothetical protein | HMY34_06450 | Not Available | - | 1317775 - 1318254 | 16826.6 |
| hypothetical protein | HMY34_06455 | Not Available | - | 1318233 - 1319021 | 29117.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.