Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| class iii poly(r)-hydroxyalkanoic acid synthase subunit phac | HMY34_06110 | P45370 | - | 1249358 - 1250419 | 39803.8 |
| class iii poly(r)-hydroxyalkanoic acid synthase subunit phae | HMY34_06115 | P45372 | - | 1250449 - 1251537 | 40241.6 |
| acetyl-coa c-acetyltransferase | HMY34_06120 | P45369 | + | 1251724 - 1252908 | 40110.4 |
| acetoacetyl-coa reductase | HMY34_06125 | P45375 | + | 1252931 - 1253662 | 25904.0 |
| polyhydroxyalkanoate synthesis repressor phar | HMY34_06130 | P45373 | + | 1253879 - 1254331 | 17380.0 |
| crispr system precrrna processing endoribonuclease ramp protein cas6 | HMY34_06135 | O28420 | + | 1254331 - 1255293 | 35184.8 |
| uma2 family endonuclease | HMY34_06140 | Not Available | + | 1255306 - 1255971 | 25176.0 |
| hypothetical protein | HMY34_06145 | Not Available | + | 1257432 - 1257764 | 12275.0 |
| hypothetical protein | HMY34_06150 | Not Available | + | 1257887 - 1258249 | 13311.8 |
| hnh endonuclease | HMY34_06155 | Not Available | + | 1258246 - 1258647 | 15282.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.