Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| gamma-glutamyltransferase | HMY34_06010 | P54422 | + | 1229160 - 1230926 | 62131.5 |
| nitrogen fixation protein | HMY34_06015 | Not Available | - | 1230936 - 1231283 | 12773.5 |
| molybdopterin-dependent oxidoreductase | HMY34_06020 | Q06457 | - | 1231354 - 1234071 | 98018.5 |
| nitrite reductase small subunit nird | HMY34_06025 | P42436 | - | 1234160 - 1234471 | 11154.5 |
| nad(p)/fad-dependent oxidoreductase | HMY34_06030 | P42435 | - | 1234484 - 1236925 | 89000.9 |
| uma2 family endonuclease | HMY34_06035 | P72873 | - | 1237208 - 1237807 | 22782.8 |
| hypothetical protein | HMY34_06040 | Not Available | + | 1238217 - 1238897 | 26366.5 |
| hypothetical protein | HMY34_06045 | Not Available | + | 1238922 - 1239923 | 36961.5 |
| duf4258 domain-containing protein | HMY34_06050 | Not Available | + | 1240025 - 1240285 | 10244.2 |
| duf2283 domain-containing protein | HMY34_06055 | Not Available | + | 1240275 - 1240469 | 7401.96 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.