Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_05810 | Not Available | - | 1197168 - 1197767 | 21771.1 |
| trna (n(6)-l-threonylcarbamoyladenosine(37)-c(2))- methylthiotransferase mtab | HMY34_05815 | P54462 | - | 1197771 - 1199054 | 47393.8 |
| hypothetical protein | HMY34_05820 | P0ADY2 | - | 1199063 - 1200943 | 68162.2 |
| Trna-asp | Not Available | Not Available | + | 1201057 - 1201133 | Not Available |
| Trna-asp | Not Available | Not Available | + | 1201202 - 1201278 | Not Available |
| Trna-val | Not Available | Not Available | + | 1201300 - 1201375 | Not Available |
| hu family dna-binding protein | HMY34_05840 | Q9CI64 | - | 1201394 - 1201666 | 9599.57 |
| endopeptidase la | HMY34_05845 | P0A9M1 | - | 1201844 - 1204264 | 88926.3 |
| atp-dependent clp protease atp-binding subunit clpx | HMY34_05850 | B8GNT9 | - | 1204407 - 1205693 | 47405.7 |
| atp-dependent clp endopeptidase proteolytic subunit clpp | HMY34_05855 | Q60BE8 | - | 1205944 - 1206558 | 22591.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.