Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| oxidative damage protection protein | HMY34_05710 | Q0A551 | + | 1181980 - 1182246 | 10328.4 |
| duf1131 family protein | HMY34_05715 | P76537 | - | 1182360 - 1182950 | 21210.3 |
| flap endonuclease | HMY34_05720 | Q8K9D0 | + | 1183065 - 1183943 | 32943.7 |
| atp-binding cassette domain-containing protein | HMY34_05725 | P63390 | - | 1184001 - 1185905 | 71807.3 |
| toll/interleukin-1 receptor domain-containing protein | HMY34_05730 | P55546 | - | 1185939 - 1186415 | 18633.4 |
| tir domain-containing protein | HMY34_05735 | Q3J9B6 | - | 1186405 - 1187382 | 36023.9 |
| type ii toxin-antitoxin system phd/yefm family antitoxin | HMY34_05740 | Not Available | + | 1187604 - 1187831 | 8432.34 |
| type ii toxin-antitoxin system vapc family toxin | HMY34_05745 | Not Available | + | 1187828 - 1188220 | 14851.9 |
| outer membrane beta-barrel protein | HMY34_05750 | P02935 | + | 1188348 - 1189052 | 25425.9 |
| dna polymerase iii subunit epsilon | HMY34_05755 | P0A1H0 | - | 1189049 - 1189768 | 26170.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.