Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| escu/yscu/hrcu family type iii secretion system export apparatus switch protein | HMY34_05460 | P69986 | + | 1138732 - 1139790 | 39546.1 |
| nfed family protein | HMY34_05465 | P0AAS3 | + | 1139802 - 1140329 | 19670.9 |
| type iii secretion system export apparatus subunit sctv | HMY34_05470 | P69955 | + | 1140360 - 1142399 | 74105.2 |
| escn/yscn/hrcn family type iii secretion system atpase | HMY34_05475 | Q7ARI8 | + | 1142396 - 1143730 | 48473.9 |
| ysco family type iii secretion system apparatus protein | HMY34_05480 | Not Available | + | 1143736 - 1144158 | 16707.9 |
| type iii secretion system stator protein sctl | HMY34_05485 | Q01253 | - | 1144112 - 1144729 | 22937.6 |
| sctk family type iii secretion system sorting platform protein | HMY34_05490 | Not Available | - | 1144707 - 1145402 | 26715.8 |
| cyclic nucleotide-binding domain-containing protein | HMY34_05495 | Not Available | - | 1145498 - 1145992 | 18970.9 |
| bola/ibag family iron-sulfur metabolism protein | HMY34_05500 | P73055 | + | 1146106 - 1146342 | 8250.81 |
| tigr00730 family rossman fold protein | HMY34_05505 | Q851C7 | + | 1146342 - 1147067 | 26863.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.