Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Thiotrichales
Family
Thiotrichaceae
Genus
Thiothrix
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Thiotrichales |
| Family | Thiotrichaceae |
| Genus | Thiothrix |
| Species | Thiothrix subterranea |
| Strain | UQM 41459, Ku-5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Thiothrix subterranea UQM 41459, Ku-5
Accession NumberCP053482.1
Gene Summary
Adenine Count
985194 bp
Thymine Count
987387 bp
Guanine Count
1033662 bp
Cytosine Count
1030425 bp
Genome Length
4036668 bp
Protein-coding Genes
3893 genes
Non-Coding Genes
62 genes
# of Chromosomes/Plasmids
4
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HMY34_05410 | Not Available | - | 1132081 - 1132656 | 21245.2 |
| tetratricopeptide repeat protein | HMY34_05415 | Not Available | - | 1132667 - 1133032 | 13158.0 |
| hypothetical protein | HMY34_05420 | Not Available | - | 1133125 - 1133334 | 7194.59 |
| esce/ysce/ssae family type iii secretion system needle protein co-chaperone | HMY34_05425 | Not Available | - | 1133458 - 1133670 | 8079.27 |
| type iii secretion system inner membrane ring subunit sctd | HMY34_05430 | Q01245 | - | 1133639 - 1135012 | 49277.1 |
| hypothetical protein | HMY34_05435 | Q01244 | - | 1135013 - 1135555 | 20806.0 |
| yscq/hrcq family type iii secretion apparatus protein | HMY34_05440 | P42713 | + | 1135962 - 1137020 | 39887.4 |
| type iii secretion system export apparatus subunit sctr | HMY34_05445 | P69980 | + | 1137023 - 1137676 | 24290.6 |
| type iii secretion system export apparatus subunit scts | HMY34_05450 | P69982 | + | 1137681 - 1137953 | 9865.39 |
| type iii secretion system export apparatus subunit sctt | HMY34_05455 | P69984 | + | 1137953 - 1138735 | 29020.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.