Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Rhizobiaceae
Genus
Agrobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Rhizobiaceae |
| Genus | Agrobacterium |
| Species | Agrobacterium vaccinii |
| Strain | B7.6 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Agrobacterium vaccinii B7.6
Accession NumberCP054150.1
Gene Summary
Adenine Count
669124 bp
Thymine Count
655679 bp
Guanine Count
899920 bp
Cytosine Count
911901 bp
Genome Length
3136624 bp
Protein-coding Genes
2906 genes
Non-Coding Genes
121 genes
# of Chromosomes/Plasmids
3
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| nudix domain-containing protein | HRR99_04715 | Q58549 | - | 933847 - 934266 | 15238.9 |
| type ii toxin-antitoxin system rele/pare family toxin | HRR99_04720 | Not Available | - | 934340 - 934651 | 12099.0 |
| type ii toxin-antitoxin system pard family antitoxin | HRR99_04725 | Not Available | - | 934648 - 934920 | 9873.67 |
| ynfa family protein | HRR99_04730 | Q8UGH9 | + | 935057 - 935380 | 11464.2 |
| sos response-associated peptidase | HRR99_04735 | O31916 | + | 935392 - 936153 | 27896.2 |
| diguanylate cyclase | HRR99_04740 | Q9A5I5 | - | 936191 - 937489 | 48178.9 |
| phosphatidylcholine/phosphatidylserine synthase | HRR99_04745 | Q9ZBM2 | - | 938051 - 938917 | 31707.4 |
| phosphatidylserine decarboxylase | HRR99_04750 | Q8UGH4 | - | 938941 - 939639 | 25510.1 |
| abc transporter atp-binding protein/permease | HRR99_04755 | Q2G506 | - | 939789 - 941678 | 69850.7 |
| lysm peptidoglycan-binding domain-containing protein | HRR99_04760 | P0ADE7 | - | 941794 - 943866 | 71422.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
