Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | HF324_28250 | Q9K6K2 | + | 889800 - 890816 | 37606.5 |
| gh92 family glycosyl hydrolase | HF324_28255 | O86365 | + | 891144 - 893435 | 86542.4 |
| gh92 family glycosyl hydrolase | HF324_28260 | O86365 | + | 893532 - 895820 | 86881.2 |
| thua domain-containing protein | HF324_28265 | Q96JK4 | - | 895932 - 899339 | 124432.0 |
| thua domain-containing protein | HF324_28270 | Not Available | - | 899348 - 900085 | 27799.8 |
| duf1080 domain-containing protein | HF324_28275 | Not Available | - | 900207 - 900929 | 26564.6 |
| c-type cytochrome | HF324_28280 | P15452 | - | 900961 - 901377 | 14742.7 |
| sugar phosphate isomerase/epimerase | HF324_28285 | A7ZAH7 | - | 901558 - 902613 | 39114.2 |
| gfo/idh/moca family oxidoreductase | HF324_28290 | P55480 | - | 902641 - 903804 | 42205.8 |
| rna polymerase sigma-70 factor | HF324_28295 | Q3IYV6 | + | 904281 - 904880 | 23494.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.