Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| inositol oxygenase | HF324_27450 | Q5Z8T3 | - | 710746 - 711636 | 35202.9 |
| laci family dna-binding transcriptional regulator | HF324_27455 | Q9K6K2 | + | 711741 - 712751 | 37268.3 |
| duf413 domain-containing protein | HF324_27460 | P31811 | - | 712758 - 713144 | 15337.6 |
| nuclear transport factor 2 family protein | HF324_27465 | Not Available | + | 713563 - 713889 | 12149.8 |
| fecr domain-containing protein | HF324_27470 | Not Available | + | 714032 - 715162 | 41693.6 |
| susc/raga family tonb-linked outer membrane protein | HF324_27475 | T2KMI3 | + | 715388 - 718849 | 129419.0 |
| ragb/susd family nutrient uptake outer membrane protein | HF324_27480 | Not Available | + | 718860 - 720308 | 54047.3 |
| thioredoxin family protein | HF324_27485 | P47938 | + | 720359 - 721549 | 45195.0 |
| rna polymerase sigma-70 factor | HF324_27490 | A1TEV0 | + | 721722 - 722312 | 23239.0 |
| thioredoxin domain-containing protein | HF324_27495 | Not Available | + | 722561 - 724201 | 61254.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.