Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ferredoxin--nadp reductase | HF324_27200 | P76081 | - | 646856 - 647896 | 39244.3 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HF324_27205 | Q11NY7 | - | 648011 - 649936 | 70809.2 |
| histidine kinase | HF324_27210 | Q4A009 | + | 650161 - 651210 | 40266.3 |
| lyttr family transcriptional regulator dna-binding domain-containing protein | HF324_27215 | Q9KU36 | + | 651311 - 652039 | 27998.0 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | HF324_27220 | C7PEQ0 | - | 652207 - 652964 | 26848.8 |
| trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsab | HF324_27225 | Q72S00 | + | 653327 - 656619 | 121114.0 |
| hypothetical protein | HF324_27230 | Not Available | + | 657174 - 657728 | 20851.4 |
| ycxb family protein | HF324_27235 | Not Available | + | 657784 - 658230 | 17139.1 |
| duf2490 domain-containing protein | HF324_27240 | Q49116 | - | 658398 - 659108 | 27616.0 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | HF324_27245 | Not Available | - | 659280 - 660770 | 54843.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.