Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| epoxide hydrolase | HF324_32405 | Q06816 | - | 1898679 - 1899779 | 40998.5 |
| hypothetical protein | HF324_32410 | Not Available | + | 1900069 - 1901199 | 42351.1 |
| amidohydrolase family protein | HF324_32415 | Q1J1B1 | + | 1901245 - 1903239 | 73470.9 |
| susd/ragb family nutrient-binding outer membrane lipoprotein | HF324_32420 | Not Available | - | 1903295 - 1904863 | 57848.2 |
| susc/raga family tonb-linked outer membrane protein | HF324_32425 | T2KPJ3 | - | 1904874 - 1908371 | 129465.0 |
| fecr domain-containing protein | HF324_32430 | Not Available | - | 1908530 - 1909492 | 35127.9 |
| rna polymerase sigma-70 factor | HF324_32435 | Q45585 | - | 1909585 - 1910160 | 21981.1 |
| ragb/susd family nutrient uptake outer membrane protein | HF324_32440 | T2KNB8 | - | 1910286 - 1911746 | 54518.3 |
| tonb-dependent receptor | HF324_32445 | T2KM18 | - | 1911771 - 1915106 | 122479.0 |
| duf4974 domain-containing protein | HF324_32450 | Not Available | - | 1915279 - 1916457 | 42697.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.