Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tonb-dependent receptor | HF324_31005 | T2KPJ3 | + | 1565533 - 1568676 | 116355.0 |
| ragb/susd family nutrient uptake outer membrane protein | HF324_31010 | T2KN63 | + | 1568691 - 1570289 | 60408.1 |
| duf1772 domain-containing protein | HF324_31015 | Not Available | + | 1570404 - 1570886 | 17220.4 |
| tigr03118 family protein | HF324_31020 | Q5UR09 | - | 1571009 - 1572121 | 39286.3 |
| tetratricopeptide repeat-containing sensor histidine kinase | HF324_31025 | Q8DKG0 | + | 1572490 - 1574583 | 79836.2 |
| endo alpha-1,4 polygalactosaminidase | HF324_31030 | Q58872 | + | 1574728 - 1575747 | 38380.7 |
| duf1016 family protein | HF324_31035 | P45423 | - | 1575816 - 1576865 | 40593.4 |
| atpase | HF324_31040 | Not Available | - | 1576911 - 1577546 | 24221.1 |
| hypothetical protein | HF324_31045 | Not Available | - | 1577797 - 1578999 | 47598.0 |
| hypothetical protein | HF324_31050 | Not Available | - | 1579436 - 1581178 | 66198.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.