Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sigma-70 family rna polymerase sigma factor | HF324_30805 | A0R2D4 | - | 1518648 - 1519244 | 23143.0 |
| dsre family protein | HF324_30810 | Not Available | - | 1519304 - 1519717 | 15008.5 |
| c-type cytochrome | HF324_30815 | A4VND8 | - | 1519745 - 1520779 | 37831.0 |
| hypothetical protein | HF324_30820 | Not Available | - | 1520677 - 1521360 | 24919.1 |
| arac family transcriptional regulator | HF324_30825 | Not Available | - | 1521459 - 1522277 | 31533.1 |
| gfo/idh/moca family oxidoreductase | HF324_30830 | O05389 | - | 1522415 - 1523626 | 44062.0 |
| rhamnogalacturonan acetylesterase | HF324_30835 | O31523 | + | 1523756 - 1524514 | 28525.5 |
| ragb/susd family nutrient uptake outer membrane protein | HF324_30840 | T2KNB8 | - | 1524641 - 1526401 | 66159.3 |
| tonb-dependent receptor | HF324_30845 | T2KPJ3 | - | 1526398 - 1529619 | 117990.0 |
| t9ss type a sorting domain-containing protein | HF324_30850 | B8NQQ7 | - | 1529664 - 1533245 | 126481.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.