Kingdom
Pseudomonadati
Phylum
Bacteroidota
Class
Chitinophagia
Order
Chitinophagales
Family
Chitinophagaceae
Genus
Chitinophaga
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Bacteroidota |
| Class | Chitinophagia |
| Order | Chitinophagales |
| Family | Chitinophagaceae |
| Genus | Chitinophaga |
| Species | Chitinophaga oryzae |
| Strain | 1303 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Chitinophaga oryzae 1303
Accession NumberCP051204.2
Gene Summary
Adenine Count
2030387 bp
Thymine Count
2061454 bp
Guanine Count
2131913 bp
Cytosine Count
2140131 bp
Genome Length
8363885 bp
Protein-coding Genes
6559 genes
Non-Coding Genes
97 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| glucuronate isomerase | HF324_30555 | A6L4U4 | + | 1445235 - 1446629 | 53255.0 |
| sugar kinase | HF324_30560 | D4GSE6 | + | 1446630 - 1447628 | 36889.8 |
| bifunctional 4-hydroxy-2-oxoglutarate aldolase/2-dehydro-3-deoxy-phosphogluconate aldolase | HF324_30565 | O68283 | + | 1447631 - 1448293 | 23763.8 |
| mfs transporter | HF324_30570 | P0AA79 | + | 1448329 - 1449615 | 47727.8 |
| altronate dehydratase | HF324_30575 | O34673 | - | 1449825 - 1451471 | 59053.3 |
| heparinase ii/iii family protein | HF324_30580 | Not Available | + | 1451767 - 1453725 | 74142.4 |
| 5-dehydro-4-deoxy-d-glucuronate isomerase | HF324_30585 | T2KN98 | + | 1454042 - 1454884 | 31675.7 |
| duf4861 family protein | HF324_30590 | T2KPL9 | + | 1454906 - 1457125 | 82581.0 |
| sdr family oxidoreductase | HF324_30595 | Q15SS0 | + | 1457135 - 1457896 | 26865.2 |
| laci family dna-binding transcriptional regulator | HF324_30600 | P46828 | + | 1457923 - 1458975 | 39327.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.